Protein Info for ABIE40_RS02660 in Rhizobium sp. OAE497
Annotation: enoyl-CoA hydratase/isomerase family protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 38% identical to HIBC4_ARATH: 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial (At3g60510) from Arabidopsis thaliana
KEGG orthology group: K01692, enoyl-CoA hydratase [EC: 4.2.1.17] (inferred from 68% identity to ret:RHE_CH00571)Predicted SEED Role
"3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4)" in subsystem Isobutyryl-CoA to Propionyl-CoA Module or Valine degradation (EC 3.1.2.4)
MetaCyc Pathways
- oleate β-oxidation (27/35 steps found)
- adipate degradation (5/5 steps found)
- superpathway of glyoxylate cycle and fatty acid degradation (11/14 steps found)
- benzoyl-CoA biosynthesis (3/3 steps found)
- superpathway of coenzyme A biosynthesis II (plants) (8/10 steps found)
- adipate biosynthesis (4/5 steps found)
- β-alanine biosynthesis II (4/6 steps found)
- acrylate degradation I (3/5 steps found)
- fatty acid β-oxidation II (plant peroxisome) (3/5 steps found)
- propanoyl-CoA degradation II (3/5 steps found)
- L-valine degradation I (5/8 steps found)
- 2-methyl-branched fatty acid β-oxidation (9/14 steps found)
- methyl ketone biosynthesis (engineered) (3/6 steps found)
- valproate β-oxidation (5/9 steps found)
- benzoyl-CoA degradation I (aerobic) (3/7 steps found)
- fatty acid β-oxidation I (generic) (3/7 steps found)
- fatty acid β-oxidation VI (mammalian peroxisome) (3/7 steps found)
- benzoate biosynthesis III (CoA-dependent, non-β-oxidative) (1/5 steps found)
- fatty acid β-oxidation IV (unsaturated, even number) (1/5 steps found)
- (8E,10E)-dodeca-8,10-dienol biosynthesis (5/11 steps found)
- 3-phenylpropanoate degradation (4/10 steps found)
- benzoate biosynthesis I (CoA-dependent, β-oxidative) (3/9 steps found)
- phenylacetate degradation I (aerobic) (3/9 steps found)
- superpathway of phenylethylamine degradation (4/11 steps found)
- (4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase) (2/13 steps found)
- docosahexaenoate biosynthesis III (6-desaturase, mammals) (2/14 steps found)
- platensimycin biosynthesis (6/26 steps found)
- Spodoptera littoralis pheromone biosynthesis (3/22 steps found)
KEGG Metabolic Maps
- Benzoate degradation via CoA ligation
- Biosynthesis of plant hormones
- Biosynthesis of unsaturated fatty acids
- Butanoate metabolism
- Caprolactam degradation
- Fatty acid elongation in mitochondria
- Fatty acid metabolism
- Geraniol degradation
- Limonene and pinene degradation
- Lysine degradation
- Propanoate metabolism
- Tryptophan metabolism
- Valine, leucine and isoleucine degradation
- alpha-Linolenic acid metabolism
- beta-Alanine metabolism
Isozymes
Compare fitness of predicted isozymes for: 4.2.1.17
Use Curated BLAST to search for 3.1.2.4 or 4.2.1.17
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (352 amino acids)
>ABIE40_RS02660 enoyl-CoA hydratase/isomerase family protein (Rhizobium sp. OAE497) MHKNSDREVFIEKRGSAGIVRLNRPKALNSLTLPMVRMLDAAFDEFEGDPDVATVVVTGE GERGFCAGGDIRALHQSGLSGSGDAEAFWREEFALNHRIAHFPKPYVAVMDGITMGGGVG LSAHGRHRVVTERTRLAMPETGIGYFPDVGATWLLPRMPGETGTWAGLTGLEMNATDALY AGLADVKIASSRLPEMIDALARMPLGSSSTAVDALLKHIAIHPHAGHPQHNREVIDRAFR FDSVEEIVAALEAEEGEFAAETRATILKRSPTSLKVTLRLLRQGRASADLAECLNRELAA CMQILKTPDFYEGVRAAVIDKDRNPKWKPAELAAVSPEAIEPFFGSVKPLAL