Protein Info for ABIE40_RS01500 in Rhizobium sp. OAE497

Annotation: DMT family transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 307 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details transmembrane" amino acids 35 to 52 (18 residues), see Phobius details amino acids 63 to 86 (24 residues), see Phobius details amino acids 92 to 111 (20 residues), see Phobius details amino acids 120 to 141 (22 residues), see Phobius details amino acids 149 to 171 (23 residues), see Phobius details amino acids 188 to 210 (23 residues), see Phobius details amino acids 222 to 243 (22 residues), see Phobius details amino acids 250 to 271 (22 residues), see Phobius details amino acids 281 to 300 (20 residues), see Phobius details PF00892: EamA" amino acids 3 to 136 (134 residues), 37.6 bits, see alignment E=1.2e-13

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (307 amino acids)

>ABIE40_RS01500 DMT family transporter (Rhizobium sp. OAE497)
MLLGILCGLATCALWGVTFVVPRAIAPFSTMDLTVTRYGLFALASIVLMVSPRFRPRNIK
PRMAITALLLGGIGYVGYFVSVAYAVRLAGAAIPPLVIGTMPVLLAVIANLRDRSVPWRL
LALPLILIAIGIGWVNLSIFATTPSGDQGAILLGIGSAMIGLILWVIYGLASTAAMQSPD
APDILQWTGLQGIGAGIGCLVLIPFTSAGTDIVFTAAELWRFILWSLIMGLAGAWLATLL
WMIASKRLPLALAAQLIVAETVFGLIFGFLFEQRLPTIAEAGGSILQLAGVGLAIAIFTP
ARGRRAH