Protein Info for ABIE40_RS00710 in Rhizobium sp. OAE497

Annotation: Z1 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 897 PF10593: Z1" amino acids 398 to 629 (232 residues), 244.4 bits, see alignment E=1.2e-76

Best Hits

KEGG orthology group: None (inferred from 60% identity to rpe:RPE_3251)

Predicted SEED Role

"Endonuclease"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (897 amino acids)

>ABIE40_RS00710 Z1 domain-containing protein (Rhizobium sp. OAE497)
MIGDSSAQEKNFRNGLVAALSNREEIPSFEDAQVLAAQMAPLFNFKGDLQDVVNEALTSV
VTKMGAGVSLIDPNTTHDDQWARKREDIKWTYSNAYEGFLQEDGWADPMVQSLSDVTGKI
LGLLQNPKEEGSWDRRGLVIGHVQSGKTANYTGLIAKAADAGYRFIIVIAGIHNNLRKQT
QERIDEAFIGRNSDPDDRKNIGVGLNKEYPHPATLTTVNGDFNKQTASQGWKLADVNKPV
ILIIKKNVSTLTSLYKWLRELNATGDGLILDVPMLMIDDEADNASVNTNKEDVNPTKTNA
EIRNILNLFAKSCYVGYTATPFANIFIDPDAYDEKVREELFPKDFIYCLDAPSTYFGAEK
VFLNEETSDTVVKTITDCEDLLPFSHKREDKVSELPPSLYRALNQFIVARAIRNLRGQRK
KHCSMMINVSRFVPIQKAVRDFISLRERKIREAVKSNYMMPESVSCQNLYMQELRAAFDE
EYSAIGCTWEEVKAELNSVFDHLHLYVVNSKSEDDLDFGKYEKEGVGLTAIAVGGLSLSR
GLTIEGLTVSYMYRNTKMYDTLMQMGRWFGYRPNFEDLCRVYLSQDSINWYAHIAHSSGE
LISQVYRMRQLKKSPKDFGLYVRKHPDSLLITARNKMRTGTEVILEQTLSGCLREAYTVL
TDQTANKRNYELIEEYWKRNFDGELENTGRKGWIARDVPLKTIEEFVLRFETHEDWQQDK
EFIVEYLHSVAKHYPRGDVLLISPKDGEGGDKEYHLRHQLRAQSKGQPDKGGWHLNKNRV
ASRGDESLGLSDTQIEAAKAAAREQAEETGGSGEPSDTHYRSERNKPLLMIHSLRAHLPK
DGSNPGPVISHPVATYGVSFPFDGHGTTIVVVANKVWIEKNRRDLVDDDLGDGDEIE