Protein Info for ABID97_RS27220 in Variovorax sp. OAS795

Annotation: serine hydrolase domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 629 signal peptide" amino acids 1 to 48 (48 residues), see Phobius details PF00144: Beta-lactamase" amino acids 70 to 381 (312 residues), 186.6 bits, see alignment E=3.7e-59

Best Hits

KEGG orthology group: None (inferred from 46% identity to bgf:BC1003_5387)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (629 amino acids)

>ABID97_RS27220 serine hydrolase domain-containing protein (Variovorax sp. OAS795)
MSDPNAAPDTRFRSPGSLSRRQSLRWAAAGLATPLLQACGGSSSSSAAPIVASSLPESVA
WCRNAILAKLAKSGTATSAVSVALMADDSVVWREAFGYSDREKGVLATPDVRFNIGSVAK
VVTALAVMILRDRGQLTLDQPLVELLPAFSMLSPAFAQVTVRQMISHSSGFPGFNKRNNW
SFVPYLDYAEDTMASLAQSHLKHEPGELAVYCNDGFTMVEPLVKALTGLPFAEFVQREIF
DPLGMSLSAYPLKFAAEGTFVHPYYEGHSLPQEMATTLATGGILSTPTDMLKFARLLMNE
GVHEGRRIVSAASVQEMGLEQSGRTLINPSRPSWRWGLGWDTVRQKGLDSAGLRAWGKNG
GTYFFLSEFIVLPEARLAMFISGCGYDYDSLNLAEGLLLRVAAERGLIPALPTPIVSTTP
PLASPVPDRTALVGVYASELPPVQVFSMDDGSLALRHWSETARQWESATRLRARSDGNWW
ADGQSTMCYRFQTVGNHRYLIRRQLAPGLLYWGELPVGEWLPPLETPLPAAWQARLGMQW
LYVSDSPDAVFSRLDPPRFARVDELAELPGYVFYNNAQLMRVVNDTTTGMIVKLPGNDGR
DLLELRVVVVDGQEEIHIGTQVFKKHLTS