Protein Info for ABID97_RS21700 in Variovorax sp. OAS795

Annotation: glycerol-3-phosphate 1-O-acyltransferase PlsY

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 211 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details transmembrane" amino acids 56 to 75 (20 residues), see Phobius details amino acids 87 to 107 (21 residues), see Phobius details amino acids 114 to 139 (26 residues), see Phobius details amino acids 143 to 143 (1 residues), see Phobius details amino acids 145 to 163 (19 residues), see Phobius details amino acids 168 to 188 (21 residues), see Phobius details TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase" amino acids 8 to 207 (200 residues), 181.8 bits, see alignment E=6.3e-58 PF02660: G3P_acyltransf" amino acids 14 to 197 (184 residues), 185.6 bits, see alignment E=3.8e-59

Best Hits

Swiss-Prot: 65% identical to PLSY_RHOFT: Glycerol-3-phosphate acyltransferase (plsY) from Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118)

KEGG orthology group: K08591, glycerol-3-phosphate acyltransferase PlsY [EC: 2.3.1.15] (inferred from 96% identity to vap:Vapar_3772)

Predicted SEED Role

"Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY" in subsystem Glycerolipid and Glycerophospholipid Metabolism in Bacteria

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.3.1.15

Use Curated BLAST to search for 2.3.1.15

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (211 amino acids)

>ABID97_RS21700 glycerol-3-phosphate 1-O-acyltransferase PlsY (Variovorax sp. OAS795)
MSFHLPSLLAIVASYLIGSLSFAVIVSKSLGMADPRSYGSGNPGATNVLRSGKKGAALAT
LLLDALKGWLPVFLIRHFGAQWGLGEGVAGLAGLAAFLGHLYPVFFGFQGGKGVATAAGV
LMGIAPWLGLATGATWLIIAVFFRYSSLAALAAAFFAPAYYLLGGNIAWPLDRTVLIAII
IMSLLLVWRHRENIRRLAAGTESKLGSKKKA