Protein Info for ABID97_RS21020 in Variovorax sp. OAS795

Annotation: GNAT family N-acetyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 172 PF13302: Acetyltransf_3" amino acids 6 to 146 (141 residues), 32.2 bits, see alignment E=4.1e-11 PF13673: Acetyltransf_10" amino acids 45 to 148 (104 residues), 33.5 bits, see alignment E=9.3e-12 PF00583: Acetyltransf_1" amino acids 48 to 145 (98 residues), 70.6 bits, see alignment E=3.7e-23 PF13508: Acetyltransf_7" amino acids 61 to 146 (86 residues), 46.9 bits, see alignment E=7.4e-16 PF08445: FR47" amino acids 87 to 150 (64 residues), 31.3 bits, see alignment E=4.2e-11

Best Hits

KEGG orthology group: None (inferred from 95% identity to vpe:Varpa_4210)

Predicted SEED Role

"GCN5-related N-acetyltransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (172 amino acids)

>ABID97_RS21020 GNAT family N-acetyltransferase (Variovorax sp. OAS795)
MSDYEVRPATLRDAKAVAEVHALAAKAAYEGILPEEELRLLAPASREAKWREAIEFSEPQ
VQVAVLDDEIVGFVGFDRSRDPKTPSTTGEIWAIYVKPEHWGKGIGVALWDAAREGLEEE
GCTTVTVWVPIRNDRAMRFHELAGFKREMKTAKTTALGTVRVEEIRLKRSVA