Protein Info for ABID97_RS20780 in Variovorax sp. OAS795

Annotation: cytochrome c peroxidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 436 signal peptide" amino acids 1 to 33 (33 residues), see Phobius details PF03150: CCP_MauG" amino acids 32 to 204 (173 residues), 105.8 bits, see alignment E=3.4e-34

Best Hits

KEGG orthology group: K00428, cytochrome c peroxidase [EC: 1.11.1.5] (inferred from 86% identity to vap:Vapar_3582)

Predicted SEED Role

"Cytochrome c peroxidase"

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.11.1.5

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (436 amino acids)

>ABID97_RS20780 cytochrome c peroxidase (Variovorax sp. OAS795)
MRALGAAGIAGAMLVAACSGNGGSGPSALSPAAQVGQKMFFDKNLSGSGAMSCASCHDPA
HAHAPANDLSVQLGGPHMDRAGLRAVPSLRYKDVTPAYADLLDNPDGISVPGPGGGFAWD
GRADTLAAQARIPLLDAREMANASSADVVKKLRASDYAPLIAKAFGARAFDDSDTAFANA
LLALQAYQREDKSFHPYSSKFDLHAGNKVGGALTPAETRGLKVFANPATGNCASCHYQGA
GLDGSSALFTDFSYEAIGVPRNAGIPANSDLQYFDMGVCGPLRTGHAPAAPDAANRFCGM
FKAPTLRNVATRTAFFHNGVMHSLEQVIRFYNTRDTQPELWYPTVGGTPKPKNDPGFPGY
GLITSQYTGGKVRKYDDMPAAQVPNIDTQLPMDGRAPGSAPPMSEQDMADLVCFLGTLSD
ADTKPAVPAKPGACVD