Protein Info for ABID97_RS20670 in Variovorax sp. OAS795

Annotation: sulfite exporter TauE/SafE family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 252 transmembrane" amino acids 12 to 32 (21 residues), see Phobius details amino acids 41 to 64 (24 residues), see Phobius details amino acids 79 to 98 (20 residues), see Phobius details amino acids 103 to 123 (21 residues), see Phobius details amino acids 135 to 159 (25 residues), see Phobius details amino acids 171 to 192 (22 residues), see Phobius details amino acids 199 to 222 (24 residues), see Phobius details amino acids 229 to 248 (20 residues), see Phobius details PF01925: TauE" amino acids 16 to 246 (231 residues), 91.6 bits, see alignment E=3.1e-30

Best Hits

KEGG orthology group: K07090, (no description) (inferred from 89% identity to vap:Vapar_3543)

Predicted SEED Role

"membrane protein, putative"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (252 amino acids)

>ABID97_RS20670 sulfite exporter TauE/SafE family protein (Variovorax sp. OAS795)
MTIPNELATAHWAAAAAVFLLAGVIKGVVGLGLPTASMGLLALWMPPVRAAALLIAPSLV
TNLWQTGPRATFRPVLRRIGGMQAGIVAGTLGGALWLGVPAGTWASVALGVALVAYALWG
LTGRQFHVRAAHERWLGPLVGAATGLVTAVTGVFVVPAVPYLQGLGFQRDALIQAMGISF
TTSTVVLAIGLAGNDGYPVAAIGGSLAMLTPALAGMVLGTWLRKRLPVAVFRRCFLAGLA
LLGFYMVARALA