Protein Info for ABID97_RS19550 in Variovorax sp. OAS795

Annotation: phosphatase PAP2 family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 225 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details transmembrane" amino acids 50 to 67 (18 residues), see Phobius details amino acids 79 to 98 (20 residues), see Phobius details amino acids 133 to 151 (19 residues), see Phobius details amino acids 158 to 176 (19 residues), see Phobius details amino acids 187 to 207 (21 residues), see Phobius details PF01569: PAP2" amino acids 80 to 202 (123 residues), 41.6 bits, see alignment E=5.3e-15

Best Hits

KEGG orthology group: None (inferred from 86% identity to vap:Vapar_3284)

Predicted SEED Role

"PAP2 (acid phosphatase) superfamily protein-like protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (225 amino acids)

>ABID97_RS19550 phosphatase PAP2 family protein (Variovorax sp. OAS795)
MLTLSALLLLLGWDATGGDLALARLAGTPVGFPWRENPFLVHVMHESAKNLSWLLVIALF
AGIRWPLGILRRLPVRARAQLACTVLLSVIAVSVLKHASHTSCPWDLKEFGGVASHVSHW
AWKVYDGGPGGCFPAGHASAAFAYVGGYFVLRRVAPRAALVWLGVALAAGLALGLSQQLR
GAHYMSHTLWTAWICWVVGFAIDLAAAPRVSHLPPAQPAVQHAGP