Gene info for ABID97_RS17725 in Variovorax sp. OAS795

Annotation: tripartite tricarboxylate transporter permease
Type 7: Pseudogene derived from a protein-coding gene
Located on scaffold NZ_JBEPOH010000001, - strand, nucleotides 3,664,726 to 3,666,241
See nucleotide sequence around ABID97_RS17725 or for all of scaffold NZ_JBEPOH010000001

Nearby Genes

500 ntABID97_RS17700 and ABID97_RS17705 are separated by 157 nucleotidesABID97_RS17705 and ABID97_RS17710 overlap by 4 nucleotidesABID97_RS17710 and ABID97_RS17715 overlap by 4 nucleotidesABID97_RS17715 and ABID97_RS17720 overlap by 4 nucleotidesABID97_RS17720 and ABID97_RS17725 are separated by 508 nucleotidesABID97_RS17725 and ABID97_RS17730 are separated by 1 nucleotidesABID97_RS17730 and ABID97_RS17735 are separated by 120 nucleotidesABID97_RS17735 and ABID97_RS17740 are separated by 127 nucleotidesABID97_RS17740 and ABID97_RS17745 overlap by 4 nucleotidesABID97_RS17745 and ABID97_RS17750 are separated by 2 nucleotides ABID97_RS17700: ABID97_RS17700 - sigma 54-interacting transcriptional regulator, at 3,655,976 to 3,657,517 _RS17700 ABID97_RS17705: ABID97_RS17705 - CerR family C-terminal domain-containing protein, at 3,657,675 to 3,658,400 _RS17705 ABID97_RS17710: ABID97_RS17710 - efflux transporter outer membrane subunit, at 3,658,397 to 3,659,890 _RS17710 ABID97_RS17715: ABID97_RS17715 - efflux RND transporter periplasmic adaptor subunit, at 3,659,887 to 3,661,110 _RS17715 ABID97_RS17720: ABID97_RS17720 - efflux RND transporter permease subunit, at 3,661,107 to 3,664,217 _RS17720 ABID97_RS17725: ABID97_RS17725 - tripartite tricarboxylate transporter permease, at 3,664,726 to 3,666,241 _RS17725 ABID97_RS17730: ABID97_RS17730 - tripartite tricarboxylate transporter TctB family protein, at 3,666,243 to 3,666,779 _RS17730 ABID97_RS17735: ABID97_RS17735 - tripartite tricarboxylate transporter substrate binding protein, at 3,666,900 to 3,667,859 _RS17735 ABID97_RS17740: ABID97_RS17740 - response regulator transcription factor, at 3,667,987 to 3,668,667 _RS17740 ABID97_RS17745: ABID97_RS17745 - sensor histidine kinase, at 3,668,664 to 3,670,085 _RS17745 ABID97_RS17750: ABID97_RS17750 - RNA-binding S4 domain-containing protein, at 3,670,088 to 3,670,522 _RS17750
Locus Name Description Strand Phenotype
ABID97_RS17700 ABID97_RS17700 sigma 54-interacting transcriptional regulator - insig.
ABID97_RS17705 ABID97_RS17705 CerR family C-terminal domain-containing protein + insig.
ABID97_RS17710 ABID97_RS17710 efflux transporter outer membrane subunit + insig.
ABID97_RS17715 ABID97_RS17715 efflux RND transporter periplasmic adaptor subunit + insig.
ABID97_RS17720 ABID97_RS17720 efflux RND transporter permease subunit + insig.
ABID97_RS17725 ABID97_RS17725 tripartite tricarboxylate transporter permease - sig.
ABID97_RS17730 ABID97_RS17730 tripartite tricarboxylate transporter TctB family protein - strong
ABID97_RS17735 ABID97_RS17735 tripartite tricarboxylate transporter substrate binding protein - strong
ABID97_RS17740 ABID97_RS17740 response regulator transcription factor + strong
ABID97_RS17745 ABID97_RS17745 sensor histidine kinase + strong
ABID97_RS17750 ABID97_RS17750 RNA-binding S4 domain-containing protein + insig.

Or browse nearby genes