Protein Info for ABID97_RS16580 in Variovorax sp. OAS795

Annotation: leucyl aminopeptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 509 PF02789: Peptidase_M17_N" amino acids 35 to 133 (99 residues), 29.1 bits, see alignment E=8.2e-11 PF00883: Peptidase_M17" amino acids 172 to 473 (302 residues), 410 bits, see alignment E=6.7e-127

Best Hits

Swiss-Prot: 92% identical to AMPA_VARPS: Probable cytosol aminopeptidase (pepA) from Variovorax paradoxus (strain S110)

KEGG orthology group: K01255, leucyl aminopeptidase [EC: 3.4.11.1] (inferred from 92% identity to vap:Vapar_2730)

Predicted SEED Role

"Cytosol aminopeptidase PepA (EC 3.4.11.1)" (EC 3.4.11.1)

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.4.11.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (509 amino acids)

>ABID97_RS16580 leucyl aminopeptidase (Variovorax sp. OAS795)
MDFQLKTLTVARAAAEKSDLLIVLVGSAPLTAKDPLSALIASARKAGDLPDKAGKLLSLY
QPDEVVAPRVVLAAIGDGKPASVRSGVIAAVNAAKANGPKRVTMVFAQDADGAAVAGAVA
AAADASYVYTTTKPSNGENGRTIRNLTLGLPNAAALGKAFDEARATVAGIEFAKEWGNRP
GNYCTPTLLADAAKGLGKLPRIKCEVLGPKEVQKLGMGSFAAVAQGSAEPLRFIVLRYQG
GPRDQAPVVLVGKGITFDTGGVSLKPAAEMDEMKFDMCGAASVLGTFRALGEIQPAINVV
GLVPTCENMNDGRAIKPGDVVTSMSGQTIEVLNTDAEGRLILCDALTYAKRFEPAAVIDI
ATLTGACVVALGGVRSGLFTADETLAAALQAAGEESQDRCWRLPLDDEYAEGLKSNFADV
ANVAGRAGGAITAAKFLQRFAGDFAWAHLDIAGTAWKSGAAKGSTGRPVGLLVSYLMARA
RGDAAAAAAAPKAARKSTGSASRKARSAQ