Protein Info for ABID97_RS16070 in Variovorax sp. OAS795

Annotation: dienelactone hydrolase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 419 PF01738: DLH" amino acids 15 to 229 (215 residues), 175.9 bits, see alignment E=8.9e-56 PF12680: SnoaL_2" amino acids 247 to 354 (108 residues), 29.8 bits, see alignment E=8e-11

Best Hits

KEGG orthology group: K01061, carboxymethylenebutenolidase [EC: 3.1.1.45] (inferred from 93% identity to vap:Vapar_5380)

Predicted SEED Role

"Dienelactone hydrolase family"

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.1.1.45

Use Curated BLAST to search for 3.1.1.45

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (419 amino acids)

>ABID97_RS16070 dienelactone hydrolase family protein (Variovorax sp. OAS795)
MSPYIDIPAADGQAFRGYLALPPSGRGPGIVLCQEIFGINDYVREVADLYAAEGYVVLAP
DLFWRMEPNVELGYSPEDWQRAFGFFQKFDLAAGVADVTASVQALRAHPACTGKVGALGF
CLGGKLAYLAAAHSGVDAAVGYYGVGIEADLDLVPKIGCPIALHFAELDKFCPAEARAQV
LAAFAGKPGAQMYVYPGVDHAFARTGGDHFDKPSTLMAHQRSMALFKEAIGPVYDLSALW
DKHCEYEFATRDVAATMGTMVAEPYVNHIPTMTGGVGARELSRFYKHHFIPTTPPDTRLT
PISRTVGATQIVDEMLFSFTHTVEIDWLLPGIAPTGKAVEIPLVAIVKFRGDKLYHEHIY
WDQASVLVQIGLLDPKGLPVAGVETARKLVDENLPSNTLMPRWPKSAALTMADPALPLG