Protein Info for ABID97_RS15360 in Variovorax sp. OAS795

Annotation: GTP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• TIGR02034: sulfate adenylyltransferase, large subunit
  • amino acids 22 to 438 (417 residues), 414 bits, E=3.7e-128
• PF00009: GTP_EFTU
  • amino acids 22 to 232 (211 residues), 128.2 bits, E=1.5e-41

Best Hits

KEGG orthology group: K00956, sulfate adenylyltransferase subunit 1 [EC: 2.7.7.4] (inferred from 95% identity to vpe:Varpa_2613)

Predicted SEED Role

"Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)" in subsystem Cysteine Biosynthesis (EC 2.7.7.4)

MetaCyc Pathways

• superpathway of L-methionine biosynthesis (by sulfhydrylation) (12/12 steps found)
• superpathway of sulfate assimilation and cysteine biosynthesis (9/9 steps found)
• assimilatory sulfate reduction I (4/4 steps found)
• assimilatory sulfate reduction III (3/3 steps found)
• superpathway of sulfur amino acid biosynthesis (Saccharomyces cerevisiae) (8/10 steps found)
• sulfate activation for sulfonation (2/2 steps found)
• assimilatory sulfate reduction IV (3/4 steps found)
• sulfite oxidation III (2/3 steps found)
• assimilatory sulfate reduction II (1/3 steps found)
• dissimilatory sulfate reduction I (to hydrogen sufide)) (2/5 steps found)
• selenate reduction (2/5 steps found)
• superpathway of sulfur metabolism (Desulfocapsa sulfoexigens) (2/6 steps found)
• superpathway of thiosulfate metabolism (Desulfovibrio sulfodismutans) (2/6 steps found)
• superpathway of sulfide oxidation (phototrophic sulfur bacteria) (4/12 steps found)
• superpathway of seleno-compound metabolism (8/19 steps found)

KEGG Metabolic Maps

• Purine metabolism
• Selenoamino acid metabolism
• Sulfur metabolism

Isozymes

Compare fitness of predicted isozymes for: 2.7.7.4

Use Curated BLAST to search for 2.7.7.4

Protein Sequence (446 amino acids)

>ABID97_RS15360 GTP-binding protein (Variovorax sp. OAS795)
MSATTTATPVTADIHGDTGTALRFITCGSVDDGKSTLIGRLLVDSKTVLQDQLAGVQRGG
ETDLALLTDGLSAEREQGITIDVAYRYFSTARRKFIIGDAPGHEQYTRNMVTAASAADAA
VVLVDATKLAWAAEVEDGTVVKRELLPQTRRHTLLAHLLRVQSIVFAVNKLDAIDDAGLA
FERISTALSVFAEAAGVEVAGIVPISALKGWNVATRHADWVGYEGPSLLELLEQLPVTVQ
DEAVPFAFPVQWVEKFSSSADTSQGRRVFWGRVAAGHVEPGQRVTVLPSNQTATVAQVLS
HTRQPKAVHAGHSAGIVLDRELDVSRGDWLLAPGAFEPVREITATVAWLDDEPLVAGRVY
WALQGHRWVKAKVARIVDRVNITTLESEPATQLEANSIGDVVLALQQPLAVLPFTQSRAL
GSLVLVDTATHKTAAAVLVQPAAAKA