Gene info for ABID97_RS10735 in Variovorax sp. OAS795

Annotation: 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
Type 7: Pseudogene derived from a protein-coding gene
Located on scaffold NZ_JBEPOH010000001, + strand, nucleotides 2,228,245 to 2,229,694
See nucleotide sequence around ABID97_RS10735 or for all of scaffold NZ_JBEPOH010000001

Nearby Genes

500 ntABID97_RS10710 and ABID97_RS10715 are separated by 129 nucleotidesABID97_RS10715 and ABID97_RS10720 are separated by 1 nucleotidesABID97_RS10720 and ABID97_RS10725 are separated by 11 nucleotidesABID97_RS10725 and ABID97_RS10730 are separated by 4 nucleotidesABID97_RS10730 and ABID97_RS10735 are separated by 51 nucleotidesABID97_RS10735 and ABID97_RS10740 are separated by 64 nucleotidesABID97_RS10740 and ABID97_RS10745 are separated by 162 nucleotidesABID97_RS10745 and ABID97_RS10750 are separated by 220 nucleotidesABID97_RS10750 and ABID97_RS10755 are separated by 98 nucleotidesABID97_RS10755 and ABID97_RS10760 are separated by 5 nucleotides ABID97_RS10710: ABID97_RS10710 - NADPH:quinone oxidoreductase family protein, at 2,223,624 to 2,224,610 _RS10710 ABID97_RS10715: ABID97_RS10715 - 5'/3'-nucleotidase SurE, at 2,224,740 to 2,225,498 _RS10715 ABID97_RS10720: ABID97_RS10720 - protein-L-isoaspartate(D-aspartate) O-methyltransferase, at 2,225,500 to 2,226,273 _RS10720 ABID97_RS10725: ABID97_RS10725 - peptidoglycan DD-metalloendopeptidase family protein, at 2,226,285 to 2,227,184 _RS10725 ABID97_RS10730: ABID97_RS10730 - sigma-70 family RNA polymerase sigma factor, at 2,227,189 to 2,228,193 _RS10730 ABID97_RS10735: ABID97_RS10735 - 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD, at 2,228,245 to 2,229,694 _RS10735 ABID97_RS10740: ABID97_RS10740 - Bax inhibitor-1/YccA family protein, at 2,229,759 to 2,230,460 _RS10740 ABID97_RS10745: ABID97_RS10745 - heme-binding protein, at 2,230,623 to 2,231,030 _RS10745 ABID97_RS10750: ABID97_RS10750 - hemin uptake protein HemP, at 2,231,251 to 2,231,463 _RS10750 ABID97_RS10755: ABID97_RS10755 - biopolymer transporter ExbD, at 2,231,562 to 2,231,975 _RS10755 ABID97_RS10760: ABID97_RS10760 - MotA/TolQ/ExbB proton channel family protein, at 2,231,981 to 2,232,697 _RS10760
Locus Name Description Strand Phenotype
ABID97_RS10710 ABID97_RS10710 NADPH:quinone oxidoreductase family protein - strong
ABID97_RS10715 ABID97_RS10715 5'/3'-nucleotidase SurE + sig.
ABID97_RS10720 ABID97_RS10720 protein-L-isoaspartate(D-aspartate) O-methyltransferase + strong
ABID97_RS10725 ABID97_RS10725 peptidoglycan DD-metalloendopeptidase family protein + strong
ABID97_RS10730 ABID97_RS10730 sigma-70 family RNA polymerase sigma factor + insig.
ABID97_RS10735 ABID97_RS10735 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD + sig.
ABID97_RS10740 ABID97_RS10740 Bax inhibitor-1/YccA family protein - insig.
ABID97_RS10745 ABID97_RS10745 heme-binding protein + insig.
ABID97_RS10750 ABID97_RS10750 hemin uptake protein HemP - no data
ABID97_RS10755 ABID97_RS10755 biopolymer transporter ExbD - no data
ABID97_RS10760 ABID97_RS10760 MotA/TolQ/ExbB proton channel family protein - no data

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