Protein Info for ABID97_RS07465 in Variovorax sp. OAS795

Annotation: SulP family inorganic anion transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 558 transmembrane" amino acids 30 to 51 (22 residues), see Phobius details amino acids 62 to 92 (31 residues), see Phobius details amino acids 99 to 120 (22 residues), see Phobius details amino acids 127 to 147 (21 residues), see Phobius details amino acids 180 to 199 (20 residues), see Phobius details amino acids 225 to 246 (22 residues), see Phobius details amino acids 280 to 301 (22 residues), see Phobius details amino acids 323 to 339 (17 residues), see Phobius details amino acids 351 to 371 (21 residues), see Phobius details amino acids 377 to 394 (18 residues), see Phobius details amino acids 414 to 443 (30 residues), see Phobius details PF00916: Sulfate_transp" amino acids 26 to 399 (374 residues), 294.6 bits, see alignment E=1.4e-91 PF16983: MFS_MOT1" amino acids 300 to 393 (94 residues), 35.3 bits, see alignment E=1.9e-12 PF01740: STAS" amino acids 458 to 548 (91 residues), 48.9 bits, see alignment E=7.4e-17

Best Hits

KEGG orthology group: K03321, sulfate permease, SulP family (inferred from 93% identity to vap:Vapar_4088)

Predicted SEED Role

"Sulfate permease" in subsystem Cysteine Biosynthesis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (558 amino acids)

>ABID97_RS07465 SulP family inorganic anion transporter (Variovorax sp. OAS795)
MQSPLNITRFRPRLLDALAGYDRTRFLKDLGAGVTVGIVALPLAMAFAIASGLKPEAGIW
TAIIAGFLVSLLGGSAVQIGGPAGAFIVIVYGIVERYGLANLLISTACAGVLLFAAGLFG
LGRLVRFVPLSIVVGFTNGIAVLILLSQLKDLLGLTVEKMPADVFSQLHAMALQIGTFNP
YAFALGLACVLGLMAWPLLMRTESKVGHAVQRLAGRMARSRAVQVGARLPGPIVALVTLT
VVSWGFDLPVETIGTRFGGIPEGGPTFALPDFSWETVKQLVTPTLTIALLGAIESLLCAR
VADQLSGQPRHDPNQELMAQGIANLVTPFFGGMPATGTIARTVTNIRSGGSSPIAGIVHA
VTLLVVVLLAAPLARHVPLAVLAGILVFVGLNMGEWREFTPGQLRHFSRHYRLLMLGTFF
LTVVFDLTVAVQAGLVLACALFIRRMSELFSVELVTMQPPVLTYRLYGAMFFGAAAKLDE
AVNAAENAPRGMTVVLDATHLIYLDATGVDALRQLHRAVLARDGLLRLESLQPQPLEVIV
RSGFADELTSGQPRPAED