Protein Info for ABID97_RS04325 in Variovorax sp. OAS795

Annotation: F0F1 ATP synthase subunit C

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF00137: ATP-synt_C
  • amino acids 9 to 71 (63 residues), 47.4 bits, E=9.5e-17
• TIGR01260: ATP synthase F0, C subunit
  • amino acids 18 to 73 (56 residues), 68.5 bits, E=1.9e-23

Best Hits

Swiss-Prot: 60% identical to ATPL_METPP: ATP synthase subunit c (atpE) from Methylibium petroleiphilum (strain ATCC BAA-1232 / LMG 22953 / PM1)

KEGG orthology group: None (inferred from 95% identity to vpe:Varpa_0386)

MetaCyc: 48% identical to ATP synthase Fo complex subunit c (Escherichia coli K-12 substr. MG1655)
ATPSYN-RXN [EC: 7.1.2.2]; RXN0-7041 [EC: 7.1.2.2]

Predicted SEED Role

"ATP synthase F0 sector subunit c"

MetaCyc Pathways

• ATP biosynthesis (1/1 steps found)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 7.1.2.2

Protein Sequence (79 amino acids)

>ABID97_RS04325 F0F1 ATP synthase subunit C (Variovorax sp. OAS795)
MTGFNILPLAVALLIGVAALGSCLGIGLVGQKFLESTARQPELVDTLQTKFFLVAGVTDG
AFIIATGIGLWFATANPFG