Protein Info for ABID97_RS02770 in Variovorax sp. OAS795

Annotation: exosortase Q

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 309 transmembrane" amino acids 23 to 43 (21 residues), see Phobius details amino acids 54 to 70 (17 residues), see Phobius details amino acids 81 to 100 (20 residues), see Phobius details amino acids 108 to 127 (20 residues), see Phobius details amino acids 133 to 154 (22 residues), see Phobius details amino acids 197 to 216 (20 residues), see Phobius details amino acids 228 to 248 (21 residues), see Phobius details amino acids 258 to 279 (22 residues), see Phobius details PF09721: Exosortase_EpsH" amino acids 30 to 273 (244 residues), 84.2 bits, see alignment E=5e-28 TIGR04178: exosortase/archaeosortase family protein" amino acids 190 to 275 (86 residues), 37.4 bits, see alignment E=1.3e-13

Best Hits

KEGG orthology group: None (inferred from 89% identity to vap:Vapar_0021)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (309 amino acids)

>ABID97_RS02770 exosortase Q (Variovorax sp. OAS795)
MSLAALAYRHPRLVDWGIHIDRVPAAGWLALQFAALAPTWAWMVRRMRDGSDDPLGLLAL
AALAALAWQCRRELRAAPRLGWLSLAGAGTVLATLLRTGLGALPALPPLAAGLVAVLALA
CGLLAFLPRRVAALPVVGLAVLALPLLSSLQFYAGYPLRVVTAEASRWLLAPGFSVAREG
SSLLVDGRLVIVDAPCSGVQMVWLGYFTACTVALWARQGDHGFVRRLPLVGLLVLGGNIL
RNSVLVAFEAVGHPLAPWAHNLFGLLVLAAVCGGIARAMVPARTGPEFAERPVPGLITAP
GGRHVDTVS