Protein Info for ABID97_RS02015 in Variovorax sp. OAS795

Annotation: bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 930 PF03710: GlnE" amino acids 58 to 259 (202 residues), 166.5 bits, see alignment E=7.6e-53 amino acids 550 to 792 (243 residues), 192 bits, see alignment E=1.2e-60 PF08335: GlnD_UR_UTase" amino acids 294 to 437 (144 residues), 107.8 bits, see alignment E=4.7e-35 amino acids 828 to 902 (75 residues), 26.8 bits, see alignment E=4.6e-10

Best Hits

KEGG orthology group: K00982, glutamate-ammonia-ligase adenylyltransferase [EC: 2.7.7.42] (inferred from 93% identity to vap:Vapar_5160)

Predicted SEED Role

"Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)" in subsystem Ammonia assimilation (EC 2.7.7.42)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.7.42

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (930 amino acids)

>ABID97_RS02015 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase (Variovorax sp. OAS795)
MTASTQRGSTETNISVNQLPATPPIAIEAAFSSYSRFVQRLRRRYAGELALLPPGAPLRE
SMMQAYEALRARGDNVGDALRIVRQLVMERLVALDCDAQAPLAVVTTAVTQLAEFALDIA
CRDACQELDAIHGAPLGPEGQRAQLWVVGMGKLGARELNVSSDIDLIYLYDLDGETRGDA
DGRGRLSNQEYFSRAVKRIYALVGDTTEHGFVFRVDLALRPNGNSGPSVVSLDALEEYFQ
VQGREWERFAWMKSRVVAPRDIVAQGLAQSLRGTVLPFVFRRYLDYSVFDSLRTLHRQIR
EQSARRSAGRPERANDVKLSRGGIREIEFTVQLLQVVRGGQFPELRTRPTLDALQRVARA
GLMPQETADALASAYEFLRKVEHRIQYLDDQQTHVLPVADDDLRWIAQTMGYPGCCPFLA
QLDTHRELVAQEFDKLLGGEKPCSGKCSGKKAAAPADLADLLDELPPAFAERIRNWCEHP
RVMALREETRARLRQLVQRTGQWLKEPDGDGPGQTPRHVDAALRWADWIEPLLRRESYLA
LLVERPAVQERLLRLLGAAKWPARYLMQHPGVIDELASDEMLSGRFVAAEFERELEARHA
SLSRTGEADEERLLNLLRHAHHAEVFRTLARDVDGRITVEQVADDLSALADTTLRVTARW
CWPHVRNIHREVPQFAVIGYGKLGGKELGYGSDLDIVFVYDDDDERAGEVYAAYVRKLIN
WLTVKTREGDLFEIDTALRPNGNSGLLTTTFEAYERYQLGRGSNTAWTWEHQAMTRARFV
LGSAELGARFDRVREAVIVAPRDRHSLKAEIIAMRDKVRGARPVKAGHFDVKHSPGGMVD
AEFAVQFLVLSESAGHPELIPNVGNIALLVRAEEAGLLPAAVGRNAAAAYRELRRVQHRA
RLNEEPTQVAPPALSREREAMLALWKAVFG