Protein Info for ABID97_RS01370 in Variovorax sp. OAS795

Annotation: cytochrome P450

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 405 PF00067: p450" amino acids 201 to 365 (165 residues), 108.6 bits, see alignment E=1.7e-35

Best Hits

Predicted SEED Role

"putative cytochrome P450 hydroxylase" in subsystem Nitric oxide synthase

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (405 amino acids)

>ABID97_RS01370 cytochrome P450 (Variovorax sp. OAS795)
MTYHARTRKVAHDDLAWDFGTQTYQVFPYEHYRWCRENDPVHRVDLPNGNVVYMITKYED
IKAAALDHKRFSAAVTDTVGWLMFKDPPEHTTIRSSVQSHLSKKGIDLIDAAIDRINRES
FQYLLDGRGGDAATYCQLFPAAVVNHMLGIKIDPQQIDYWIGCSLRAMGQAFGLPGKPED
HKGQADLVAFLEGVVRDYIAHPEDNIGSLLAQNAAEGGKLSVRNVADFMNMLFTGGHETT
TFTLSSAIGILAQDPALFRRIKDDRSRIPAFIDETLRYRPVLQSNPRIAAEDITIRGVTI
PKGSIVKLCTGSGNMDEDVFENPEAFNIDRPNVSEHLSFSRGVHTCIGAVLARRELSKAM
THFFETIASIQLDADRPVKPHLGGTGNEHGFDSVPVLIETDAARA