Protein Info for ABI39_RS20365 in Phocaeicola dorei CL03T12C01

Annotation: phosphate ABC transporter ATP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 TIGR00972: phosphate ABC transporter, ATP-binding protein" amino acids 4 to 250 (247 residues), 407.8 bits, see alignment E=7.1e-127 PF00005: ABC_tran" amino acids 19 to 174 (156 residues), 115.3 bits, see alignment E=3.4e-37

Best Hits

Swiss-Prot: 91% identical to PSTB_BACTN: Phosphate import ATP-binding protein PstB (pstB) from Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)

KEGG orthology group: K02036, phosphate transport system ATP-binding protein [EC: 3.6.3.27] (inferred from 99% identity to bvu:BVU_3937)

Predicted SEED Role

"Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)" in subsystem High affinity phosphate transporter and control of PHO regulon or Phosphate metabolism (TC 3.A.1.7.1)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.6.3.27

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (250 amino acids)

>ABI39_RS20365 phosphate ABC transporter ATP-binding protein (Phocaeicola dorei CL03T12C01)
MNKIDAKHVNFFYGDFQALKDISMTIEEKEVVAFIGPSGCGKSTFLRLFNRMNDLIPGSR
LEGEILIDGRNIYDKSVQVDELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNEFIR
HRVEETLKGAALWDEVKNKLKESAFALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPI
STAKVEELIHELKKEYTIVIVTHNMQQAARVSDKTAFFYMGNMVEYDDTKKIFTNPGKEA
TQNYITGRFG