Protein Info for ABI39_RS17315 in Phocaeicola dorei CL03T12C01

Annotation: alpha amylase C-terminal domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF02922: CBM_48
  • amino acids 55 to 136 (82 residues), 56.9 bits, E=3.4e-19
• PF00128: Alpha-amylase
  • amino acids 201 to 269 (69 residues), 32.3 bits, E=9.9e-12
• PF02806: Alpha-amylase_C
  • amino acids 581 to 672 (92 residues), 61.1 bits, E=1.6e-20

Best Hits

KEGG orthology group: K00700, 1,4-alpha-glucan branching enzyme [EC: 2.4.1.18] (inferred from 99% identity to bvu:BVU_3322)

Predicted SEED Role

"1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)" in subsystem Glycogen metabolism or Trehalose Biosynthesis (EC 2.4.1.18)

MetaCyc Pathways

• glycogen biosynthesis I (from ADP-D-Glucose) (3/4 steps found)
• glycogen biosynthesis II (from UDP-D-Glucose) (1/4 steps found)
• starch biosynthesis (5/10 steps found)
• glycogen biosynthesis III (from α-maltose 1-phosphate) (3/8 steps found)

KEGG Metabolic Maps

• Starch and sucrose metabolism

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.4.1.18

Protein Sequence (675 amino acids)

>ABI39_RS17315 alpha amylase C-terminal domain-containing protein (Phocaeicola dorei CL03T12C01)
MENTTPKLGIIESDPWLEPYSAAIEGRHQHALDKELELTGGKGTLSDFATGYLYFGLHRT
RRGWVFREWAPNAKEIYLIGDFNDWKEHGDYRMYHVKNSPGVWEVELQSGAIKHGDLYKL
KVRWNGGEGERIPAWANRVVQDDQTKIFSAQVWEPENPYRFRKKVFRAKTDPLMIYECHI
GMAQEEERVGTYNEFREKILPRIAEAGYNCIQIMAIQEHPYYGSFGYHVSSFFAPSSRFG
TPDELKELIDTAHRMGIAVIMDIVHSHAVKNEVEGLGNFAGDPNQYFYPGGRREHPAWDS
LCFDYGKNEVIHFLLSNCKYWMDEFRFDGFRFDGVTSMLYYSHGLGEAFCNYGDYFNGNQ
DDNAICYLTLANKLIHQINSKAITIAEEVSGMPGLAAPIQNGGYGFDYRMAMNIPDYWIK
TIKEKIDEDWKPSSMFWEVTNRRKDEKTISYAESHDQALVGDKTIIFRLIDADMYWHFQK
GDENYTVHRGIALHKMIRLLTASTINGGYLNFMGNEFGHPEWIDFPREGNGWSHKYARRQ
WGLFDNKNLCYHYLGDFDSAMVHLIESVKNIQDTPVIEVWHNDGDQVLAYRRKNLIFVFN
FNPTKSFTDYGFLVPVGAYDVVLNTDATAFGGNGLADDSIRHFTNFDPLYKKDKKEWLKL
YLPARSAVVLKKVKE