Protein Info for ABI39_RS16790 in Phocaeicola dorei CL03T12C01

Annotation: GNAT family N-acetyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 278 transmembrane" amino acids 186 to 205 (20 residues), see Phobius details PF00583: Acetyltransf_1" amino acids 163 to 253 (91 residues), 33.4 bits, see alignment E=7.3e-12 PF13673: Acetyltransf_10" amino acids 163 to 255 (93 residues), 28.6 bits, see alignment E=1.8e-10 PF13508: Acetyltransf_7" amino acids 174 to 254 (81 residues), 34.4 bits, see alignment E=3.6e-12

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (278 amino acids)

>ABI39_RS16790 GNAT family N-acetyltransferase (Phocaeicola dorei CL03T12C01)
MNRIDSLKDLNALVNEIRLLRKGYISNLFINPLKNSLWIKKRELFYISFTEGFFVIRKSQ
LVNCLFYITTDTEHLRRGLADYYHLLNFTIMVDLVGDAKIVSIKQIFLDSGFRQYEFIYR
MSRVGIPNLSSFDSGVSYAELNDTNIIRQLLLSNFNPLSEQIPEVEEIVQFIKNKRILVY
KQGNEICGFIIFELTGLTLYLRYWFVCSQYRDFHIGSKLFNAFMYEGRNTKRQLFWVIAD
NENAIKRYKHYGFEAENMFDYVLMKSDMNTFIECKPSI