Protein Info for ABI39_RS11665 in Phocaeicola dorei CL03T12C01

Annotation: bifunctional folylpolyglutamate synthase/dihydrofolate synthase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 428 TIGR01499: bifunctional protein FolC" amino acids 30 to 426 (397 residues), 383.5 bits, see alignment E=7.9e-119 PF08245: Mur_ligase_M" amino acids 51 to 239 (189 residues), 44.2 bits, see alignment E=1.2e-15

Best Hits

KEGG orthology group: K11754, dihydrofolate synthase / folylpolyglutamate synthase [EC: 6.3.2.12 6.3.2.17] (inferred from 98% identity to bvu:BVU_2328)

Predicted SEED Role

"Dihydrofolate synthase (EC 6.3.2.12) / Folylpolyglutamate synthase (EC 6.3.2.17)" in subsystem Folate Biosynthesis (EC 6.3.2.12, EC 6.3.2.17)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 6.3.2.12 or 6.3.2.17

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (428 amino acids)

>ABI39_RS11665 bifunctional folylpolyglutamate synthase/dihydrofolate synthase (Phocaeicola dorei CL03T12C01)
MNYEETLDYLYNSAPLFQHIGKDAYKAGLENTYLLDEYFNHPHRQFRTIHIAGTNGKGSC
SHTLAAILQSAGYKTGLYTSPHLIDFRERIRVNGIPVSKEYVIDFVEKHRVFFEPLHPSF
FELTTAMAFHYFAQSQIDVAIIEVGLGGRIDCTNIIRPDLCVITNISFDHIQFLGNTLAK
IATEKAGIIKEKTPVVIGETTPETKPIFTTRAKEVNAPIYFAEEEQLLHSSSINEKGKRI
YQTTDYLNLEGELEGLCQLKNTNTLLSAIRLLKQAGYQLTESNIRKGFSQVCELTGLMGR
WQKLESEPTLICDTGHNVGGISYIIEQLKHQKYERLHIVIGMVNDKDISGVLSMLPKNAT
YYFTKASVKRALSEKELQSLAMQSRLHGDAYPDVETAVAAAKEKANKNDFIFVGGSSFIV
ADLLKFHV