Protein Info for ABI39_RS11340 in Phocaeicola dorei CL03T12C01

Annotation: S46 family peptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 721 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details PF10459: Peptidase_S46" amino acids 21 to 719 (699 residues), 911.2 bits, see alignment E=8.8e-278

Best Hits

Swiss-Prot: 100% identical to DPP7_BACV8: Dipeptidyl-peptidase 7 (dpp7) from Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / NBRC 14291 / NCTC 11154)

KEGG orthology group: None (inferred from 100% identity to bvu:BVU_2253)

Predicted SEED Role

"FIG00403185: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (721 amino acids)

>ABI39_RS11340 S46 family peptidase (Phocaeicola dorei CL03T12C01)
MKKFKLLLLALMCVAFLPSKADEGMWLLQLMQEQHLADRMKAQGLLLEADDIYNPNRVSL
KDAVGIFGGGCTGEIISPDGLILTNHHCGYGAIQQHSSVEHDYLTDGFWAKSRKEELPTP
GLKFKFVERIVDVTDKVNNKVKSGEVKEEETFEYDFLKKLADEELKASDLNGKAGISAQA
LPFYAGNKFYLIYLKTYSDVRMVAAPPSSIGKFGGETDNWMWPRHTCDFSVFRIYADANG
EPAEYNENNVPLKAKKHLAISLKGINEGDYAMIMGFPGSTNRYLTQSEVKQRMHSTNEPR
IRIRGVRQDVLKKEMAASDKVRIQYASKYAGSSNYWKNSIGMNKAIIDNKVLETKAEQEA
KFAAFAKAKGNTDYEKVVSEIDAAIEKSNPILYNYTCFREVFQGGIEFGTPYLILDKLKE
AIKNKDKEAINKNIETLKKVYADVHNKDYDHEVDRKVAKALLPLYAEMVPADALPAFYTT
IQKDFKGNYDAYVDHCYDNSIFSNEANFNKFIKKPTVKAIEKDPMTAYVRAKYDLMNKLG
NELAESMKGMDLLHKTYVRGLCEMYSPEPKAPDANFTIRLTYGNVKSYNPKDGVHYKYYT
TLKGVMEKEDPTNPEFVVPAKLKELYEAKDFGRYALPNGDMPACFLTTNDITGGNSGSPV
INGNGELIGAAFDGNWESLSGDINFDNNLQRCIAVDIRYVLFIIDKLGGCKHLIDEMTIV
E