Protein Info for ABI39_RS01815 in Phocaeicola dorei CL03T12C01

Annotation: glutamate formimidoyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 TIGR02024: glutamate formiminotransferase" amino acids 4 to 299 (296 residues), 425.3 bits, see alignment E=5e-132 PF07837: FTCD_N" amino acids 6 to 181 (176 residues), 257.3 bits, see alignment E=6.8e-81 PF02971: FTCD" amino acids 184 to 289 (106 residues), 104.5 bits, see alignment E=5e-34

Best Hits

Swiss-Prot: 52% identical to GLFT_STRP1: Glutamate formimidoyltransferase (M5005_Spy1772) from Streptococcus pyogenes serotype M1

KEGG orthology group: K00603, glutamate formiminotransferase [EC: 2.1.2.5] (inferred from 98% identity to bvu:BVU_0334)

Predicted SEED Role

"Glutamate formiminotransferase (EC 2.1.2.5) @ Glutamate formyltransferase" (EC 2.1.2.5)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.1.2.5

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (300 amino acids)

>ABI39_RS01815 glutamate formimidoyltransferase (Phocaeicola dorei CL03T12C01)
MNWTKIMECVPNFSEGRDLQKIDEIVSPFRAKAGVKLLDYSNDEDHNRLVVTVVGEPDAL
KEAVIEAIGIAVELIDLNHHQGQHPRMGAVDVVPFIPIKECTMEDAIAVSKEVGQRVASQ
YNLPVFLYEKSASAPHRENLAVIRKGEFEGMKEKIHQPEWHPDFGPAERHPTAGTVAIGA
RMPLVAYNINLNTPSLEIAHDIAKKIRFIGGGLRYCKAMGVELKDRGITQVSMNLTDYSK
TAIYRAFEMVRFEAKRYGVSIIGSEIVGLVPMEALIDTASYYLGLENFSMQQVLEARIME