Protein Info for A4249_RS13495 in Brevundimonas sp. GW460-12-10-14-LB2

Annotation: organic hydroperoxide resistance protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 141 TIGR03561: peroxiredoxin, Ohr subfamily" amino acids 6 to 139 (134 residues), 180.1 bits, see alignment E=1.2e-57 PF02566: OsmC" amino acids 41 to 137 (97 residues), 52 bits, see alignment E=4.3e-18

Best Hits

Swiss-Prot: 58% identical to OHR_XANAC: Organic hydroperoxide resistance protein (ohr) from Xanthomonas axonopodis pv. citri (strain 306)

KEGG orthology group: None (inferred from 78% identity to swi:Swit_2957)

Predicted SEED Role

"Organic hydroperoxide resistance protein" in subsystem Oxidative stress

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A160I211 at UniProt or InterPro

Protein Sequence (141 amino acids)

>A4249_RS13495 organic hydroperoxide resistance protein (Brevundimonas sp. GW460-12-10-14-LB2)
MSINTLYRTTAVATGGRDGRAATTDGSLDVALGTPKELGGAGVGNNPEQLFAAGYAACFL
GAMKFVASQGGYAKVPADAAVNATVGIGPRSDKGFGLEVALEVSLPGVDRAEAEALVAEA
DTVCPYSHATRGNIAVTQTVA