Protein Info for A4249_RS13140 in Brevundimonas sp. GW460-12-10-14-LB2

Annotation: S8 family peptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 680 PF00082: Peptidase_S8" amino acids 13 to 276 (264 residues), 147 bits, see alignment E=3.8e-47

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A160I1A1 at UniProt or InterPro

Protein Sequence (680 amino acids)

>A4249_RS13140 S8 family peptidase (Brevundimonas sp. GW460-12-10-14-LB2)
MKVQSAWQAGATGAGVTVAVVDSGIANTLPELEGRISSASTDVVVGRNTPYVASSSHGTR
VSGVIASNFNGFGTIGVAYNSTILSIRTDISDCTDKNTEVCFSSSDLVRALDYAVANGVK
IINMSLGGDGRLGSAFESALLRAVNSGAVIVASSGNDGNANPGWPARYAIDPRFAGSVIA
VGSHGATDAMSSFSNRAGDTAAGYISAPGEDVITGCEGTSCWRVNGTSFSAPHVSGALAL
LMQAFPNLSARAALDILLTTARDAGDPGTDIVYGRGLLDMAGAFRPVGTTSTPMADGSSI
VSMSEPGSFVGAAFGDAFGRQTALNTVLYDAYDRMFAVQLGGAYPTAPSRSYQAAPFEQN
TTATTSLALPGGGRLNLIAAQPSARPDPIAPRHDLYDAPWMGDEPRQEAMLDVATGRMNF
SVWQGKGGATSPFNGAAGDGFAALAQADHAVRGAMRFGPVTVSGESGGGDRRMPLRRVEQ
DASTYSRAAIGWRGAEGGLSFSVGALDERLGPLGAFLPGGSDFALPSRTSFYALGGDWTL
RPGLRLIGEAGMGATRIEGRFLSTDQAAISSNWRLGLLTGCSMICDRISFTLAQPLRIER
GTFSAMLADVPVEYFDPLTYSRRSFSATPSGRQIDFILGGERRLWDGSSMTLQAVASREP
RHVADAPPEFALIGAWRRQF