Protein Info for A4249_RS11745 in Brevundimonas sp. GW460-12-10-14-LB2

Annotation: cation transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 201 transmembrane" amino acids 15 to 36 (22 residues), see Phobius details amino acids 52 to 68 (17 residues), see Phobius details amino acids 75 to 93 (19 residues), see Phobius details amino acids 104 to 124 (21 residues), see Phobius details amino acids 145 to 162 (18 residues), see Phobius details amino acids 168 to 186 (19 residues), see Phobius details PF01545: Cation_efflux" amino acids 15 to 190 (176 residues), 62.1 bits, see alignment E=3.2e-21

Best Hits

KEGG orthology group: None (inferred from 76% identity to bsb:Bresu_1653)

Predicted SEED Role

"cation efflux protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A160I0W3 at UniProt or InterPro

Protein Sequence (201 amino acids)

>A4249_RS11745 cation transporter (Brevundimonas sp. GW460-12-10-14-LB2)
MSGAHETEQVQRRTLLVVLFLNALLFVGLGVGGLAADSSALLANAVDNGSDAAVYLISFL
AVGRALIWKTRAAQVSGVMLLIFSVLVLLDALRRTLTGTEPVGPTMMVLAVVAAVINLIC
LLLIRRQQSSDVNMKAAETFSLNDFASNGGILVAGGLVMWLDQSWPDLLVGVLVAAIAAK
GGFDILRDARLARRDAESSVT