Protein Info for A4249_RS11590 in Brevundimonas sp. GW460-12-10-14-LB2

Annotation: sulfite exporter TauE/SafE family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 264 transmembrane" amino acids 17 to 41 (25 residues), see Phobius details amino acids 48 to 66 (19 residues), see Phobius details amino acids 78 to 96 (19 residues), see Phobius details amino acids 105 to 123 (19 residues), see Phobius details amino acids 143 to 165 (23 residues), see Phobius details amino acids 176 to 200 (25 residues), see Phobius details amino acids 206 to 224 (19 residues), see Phobius details amino acids 236 to 254 (19 residues), see Phobius details PF01925: TauE" amino acids 13 to 252 (240 residues), 178.5 bits, see alignment E=9.1e-57

Best Hits

KEGG orthology group: K07090, (no description) (inferred from 70% identity to swi:Swit_3745)

Predicted SEED Role

"Arginine/ornithine antiporter ArcD" in subsystem Arginine Deiminase Pathway or Arginine and Ornithine Degradation or Polyamine Metabolism

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A161IIV1 at UniProt or InterPro

Protein Sequence (264 amino acids)

>A4249_RS11590 sulfite exporter TauE/SafE family protein (Brevundimonas sp. GW460-12-10-14-LB2)
MDLSPLQYGLGAGAGSLVGFTLGLVGGGGSILAVPLIVYLVGVKEPHLAIGTSAFAVAAN
AFANVINHARHGTVKWKIASLFAVAGVLGAFLGSSLGKAVDGQKLLALFAVLMLVVGVLM
LRGRSAGGDPNVQLDRRNAPKLVGTGLATGVMSGFFGIGGGFLIVPSLMFSTRMPIYYAV
GSSLVGVTAFGLTTAFNYALDGWVDWPLAAVFIGGGVLGGLVGARLAKALSGQKGVLNTV
FAGLIFVVAFYMLYRSAGALGLIG