Protein Info for A4249_RS10355 in Brevundimonas sp. GW460-12-10-14-LB2

Annotation: SufE family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 145 PF02657: SufE" amino acids 20 to 139 (120 residues), 140.4 bits, see alignment E=1.3e-45

Best Hits

Swiss-Prot: 43% identical to YA00_RHIME: Uncharacterized SufE-like protein R01000 (R01000) from Rhizobium meliloti (strain 1021)

KEGG orthology group: K02426, cysteine desulfuration protein SufE (inferred from 79% identity to bsb:Bresu_1200)

Predicted SEED Role

"Sulfur acceptor protein SufE for iron-sulfur cluster assembly"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A160HYD4 at UniProt or InterPro

Protein Sequence (145 amino acids)

>A4249_RS10355 SufE family protein (Brevundimonas sp. GW460-12-10-14-LB2)
MTDRTPPTDTLDQTLAELAEDFDLLGDWEQRIEYVIELGKGLAPLDEADRIEANKVPGCA
AQVWLATTQDDGRLWFAADSDSALSKGNIALLLKLYSGRTAREIVAFDARAALDRLGLPS
ALTRQRANGLNSMVGRIREAALAVQ