Protein Info for A4249_RS10350 in Brevundimonas sp. GW460-12-10-14-LB2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 222 transmembrane" amino acids 13 to 32 (20 residues), see Phobius details amino acids 62 to 80 (19 residues), see Phobius details amino acids 101 to 120 (20 residues), see Phobius details amino acids 140 to 158 (19 residues), see Phobius details amino acids 165 to 186 (22 residues), see Phobius details amino acids 198 to 221 (24 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A160HYC2 at UniProt or InterPro

Protein Sequence (222 amino acids)

>A4249_RS10350 hypothetical protein (Brevundimonas sp. GW460-12-10-14-LB2)
MDLLKILRSFEEFLFEAVSWLVFYPLTLWRILRGPLAAMDYSDREQSDSEERRYDDALSP
PLFLLATIVLTNLLSMALHVPPPPEATDLSRVVYASQQNLVLFRSLAFSLIPLVAAVTLL
RHEKKRISRETLRAPFYAQCYLAAVCAAFVSAGGTIFQRPELPNAVGAAIMTGGTAWFVV
VQSRWFARRLNVSKGRGAVIAVLALIRALIYLLAILIPIALI