Protein Info for A4249_RS10200 in Brevundimonas sp. GW460-12-10-14-LB2

Annotation: YcgN family cysteine cluster protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 153 PF03692: CxxCxxCC" amino acids 22 to 90 (69 residues), 42.8 bits, see alignment E=3.4e-15

Best Hits

Swiss-Prot: 72% identical to Y3920_CAUSK: UPF0260 protein Caul_3920 (Caul_3920) from Caulobacter sp. (strain K31)

KEGG orthology group: K09160, hypothetical protein (inferred from 76% identity to pzu:PHZ_c2700)

Predicted SEED Role

"conserved protein of unknown function; putative YcgN protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A160I0B1 at UniProt or InterPro

Protein Sequence (153 amino acids)

>A4249_RS10200 YcgN family cysteine cluster protein (Brevundimonas sp. GW460-12-10-14-LB2)
MQPYWETKTLAEMSPSEWEGLCDGCGLCCVIRFEDEDTGEVIPTRVHCKLFDPEACACSD
YANRKAQVPDCIKLTPGNIEALEWMPKSCAYRRLHEGRPLAKWHHLISGSRETVHTAGVS
VRGQTISELSLAEPEDALDFEAPEWTVERGRER