Protein Info for A4249_RS09555 in Brevundimonas sp. GW460-12-10-14-LB2

Annotation: iron-containing redox enzyme family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 225 signal peptide" amino acids 1 to 20 (20 residues), see Phobius details PF14518: Haem_oxygenas_2" amino acids 39 to 200 (162 residues), 85.6 bits, see alignment E=1.9e-28

Best Hits

KEGG orthology group: None (inferred from 59% identity to cak:Caul_2431)

Predicted SEED Role

"long-chain acyl-CoA synthetase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A160HY24 at UniProt or InterPro

Protein Sequence (225 amino acids)

>A4249_RS09555 iron-containing redox enzyme family protein (Brevundimonas sp. GW460-12-10-14-LB2)
MSFFETLVAATATERAAFAAIPQIRDGLAGRISRDTYVAYLAQAYHHVRHTVPLMQAART
RLDDDHAVFKAALDDYIAEETGHEQWILNDIRAAGGDPDQTVHNGPNVATELMVAYAYDT
IQRVNPMAFFGMVYVLEGTSIQLASVGAEAVQQSLGLPPAAFTYLISHGALDQDHILFLK
QLLDGVSDANDRAAIVHMAKVMFGLFGGVFASIPHIAARETVDAV