Protein Info for A4249_RS09170 in Brevundimonas sp. GW460-12-10-14-LB2

Annotation: Pr6Pr family membrane protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 220 signal peptide" amino acids 1 to 37 (37 residues), see Phobius details transmembrane" amino acids 46 to 68 (23 residues), see Phobius details amino acids 81 to 101 (21 residues), see Phobius details amino acids 112 to 133 (22 residues), see Phobius details amino acids 145 to 167 (23 residues), see Phobius details amino acids 180 to 204 (25 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 40% identity to ccs:CCNA_03540)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A160HXP6 at UniProt or InterPro

Protein Sequence (220 amino acids)

>A4249_RS09170 Pr6Pr family membrane protein (Brevundimonas sp. GW460-12-10-14-LB2)
MFRKRDQPRLWRATFAVVGWTALALQYLLMIAPAQGWTVLERTINYFSFFTILTNILVAL
AFTGSLLGEGSRLARWSASEGVRAAVAMYIVVVGVVYHFLLHPYWNPTGWSLVVNLVLHY
VMPAAFVLDWLWFSPKGRLRWIDPAKWLAFPLVYGGWTLVHGLATRWWPYRFVNVDQLGL
VRVVVIFGVLLVFFLIVGLGPVGLDRLFGRATRDRGATPA