Protein Info for A4249_RS08275 in Brevundimonas sp. GW460-12-10-14-LB2

Annotation: DUF817 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 276 transmembrane" amino acids 20 to 45 (26 residues), see Phobius details amino acids 56 to 74 (19 residues), see Phobius details amino acids 85 to 105 (21 residues), see Phobius details amino acids 112 to 134 (23 residues), see Phobius details amino acids 150 to 170 (21 residues), see Phobius details amino acids 176 to 194 (19 residues), see Phobius details amino acids 201 to 221 (21 residues), see Phobius details amino acids 241 to 261 (21 residues), see Phobius details PF05675: DUF817" amino acids 19 to 255 (237 residues), 338.6 bits, see alignment E=1.1e-105

Best Hits

KEGG orthology group: None (inferred from 81% identity to bsb:Bresu_1615)

Predicted SEED Role

"FIG00879402: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A160I127 at UniProt or InterPro

Protein Sequence (276 amino acids)

>A4249_RS08275 DUF817 domain-containing protein (Brevundimonas sp. GW460-12-10-14-LB2)
MTRAEAWADGSRPRRYAYEFLWFGLKQGWACLFGGLMLALILGTFPLWPEGAPVSRYDFL
AVGAVVIQAAMLIFRLESWEEARVIFLFHVAGTIMELFKTAHGSWVYPEDSLLRIGAVPL
FSGFMYAAVGSYIARVQRIFHIRVRRYPPLWTTWVLAAAIYINFFAHHWLPDFRKVLFVL
TILLFCRGWFFFTVDRMRLKMPLLLGFGLVALFIWFAENLGTLGRAWVYPGQADGWEMVS
LAKLGSWFLLMIISVVLVSLVHRPEEELSGPVTPRA