Protein Info for A4249_RS07760 in Brevundimonas sp. GW460-12-10-14-LB2

Annotation: A24 family peptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 254 transmembrane" amino acids 6 to 27 (22 residues), see Phobius details amino acids 77 to 96 (20 residues), see Phobius details amino acids 102 to 121 (20 residues), see Phobius details amino acids 130 to 149 (20 residues), see Phobius details amino acids 155 to 174 (20 residues), see Phobius details amino acids 182 to 199 (18 residues), see Phobius details amino acids 205 to 223 (19 residues), see Phobius details amino acids 234 to 252 (19 residues), see Phobius details PF06750: A24_N_bact" amino acids 13 to 87 (75 residues), 98 bits, see alignment E=2.7e-32 PF01478: Peptidase_A24" amino acids 110 to 216 (107 residues), 58.8 bits, see alignment E=6.7e-20

Best Hits

KEGG orthology group: K02654, leader peptidase (prepilin peptidase) / N-methyltransferase [EC: 2.1.1.- 3.4.23.43] (inferred from 65% identity to bsb:Bresu_1490)

Predicted SEED Role

"prepilin peptidase"

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.1.1.-, 3.4.23.43

Use Curated BLAST to search for 2.1.1.- or 3.4.23.43

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A160HZA8 at UniProt or InterPro

Protein Sequence (254 amino acids)

>A4249_RS07760 A24 family peptidase (Brevundimonas sp. GW460-12-10-14-LB2)
MNPVLAAAVMGGLGLVVGSFIAAVSVRLPRDEDIVVARSRCRGCDQTLRPWELVPVFSWL
ALRGRCARCHTRISPRYPLIELASAGIGIWAGLWGATGGASTFMIAATAVLGWQLLLIAI
VDGEHFWLPDSLTLPLISTGVTVALILDWGLGFSHLIGAAVGFCGLWLVGWLYQLVRKRQ
GLGGGDPFLFAGAGAWVGWIGLPSVLLWACAVGLSLVFGILVVRRSVSGSEKLPFGVFLA
VGIWTTWLYGPLGF