Protein Info for A4249_RS06785 in Brevundimonas sp. GW460-12-10-14-LB2

Annotation: endolytic transglycosylase MltG

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 386 transmembrane" amino acids 20 to 43 (24 residues), see Phobius details PF02618: YceG" amino acids 57 to 331 (275 residues), 269 bits, see alignment E=2.6e-84 TIGR00247: conserved hypothetical protein, YceG family" amino acids 157 to 332 (176 residues), 175 bits, see alignment E=1.1e-55

Best Hits

KEGG orthology group: K07082, UPF0755 protein (inferred from 69% identity to bsb:Bresu_2591)

Predicted SEED Role

"FIG004453: protein YceG like"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A160HWX9 at UniProt or InterPro

Protein Sequence (386 amino acids)

>A4249_RS06785 endolytic transglycosylase MltG (Brevundimonas sp. GW460-12-10-14-LB2)
MFGRGRVEKSSGRSGFTVSLLTASATFGLFLLVALIAVWAVYYAPGPSARQGQTTVVTLP
SGSGVSAIAARMKAAGVIRSTDLFRAAATLTGADRRLRAGEYEVPSGTSLAGVLNLLVEG
RVVRHFVTLPEGWSSLQAVDILNKEAVLTGTIAETPEEGSLWPDTYEVSRGDTRQSVIDR
MQRAATENLRLLWSQRSPATVARTPQEAVILASIVEKETALAAERPRVAAVFSNRLRAGM
RLESDPTIVYGVTKGRPLGRGIRRSELLAPAPWNTYQINGLPPTPIANPGKEAVKAVLNP
PADPALFFVADGSGGHAFALTYDEHLQNVARWRQIERQKAGLPPEATPPATPGTSPAPMT
SEPTATSVENGQATITLPAGATQGPR