Protein Info for A4249_RS06680 in Brevundimonas sp. GW460-12-10-14-LB2

Annotation: tipN

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 860 transmembrane" amino acids 132 to 153 (22 residues), see Phobius details amino acids 165 to 187 (23 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 74% identity to bsb:Bresu_2289)

Predicted SEED Role

"FIG00449789: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A160HWP4 at UniProt or InterPro

Protein Sequence (860 amino acids)

>A4249_RS06680 tipN (Brevundimonas sp. GW460-12-10-14-LB2)
MKSPKRPPLKLTDDEAVAPAELSTSDKMLVDEATPSLDPIPEPDFEIVQPTFEPPMSERR
RRRLLEEQRQAEERALAAERGAAPVNAKPTPETPVDMAVAVGQPPAPFELSKPPAVKTVQ
AKAQAEPSGRHAYVIAGVASALWIGGVASWAAYEFGAGGAELDPLRIAIYALIALAPAGL
AIMLAHAVRQGAGLAAETRRARQLAEALVAPTALAAQQTGEVLQSLRSDIDHATLAAERA
RNDMTLLREALAQETTRLNEAAENAGRTARRLTENLGRERDQMQTLGIHLDTQASGVIDA
VERQSRMVADASDLAQAQLREAEAALAARAADLAAAAGEAQDAARVASDDLARQTIRLEN
AGSGVAEQIQSVEEGLSQQRAALVTAAYALRTDQEDFSAQVESQRAQLIEHLSATRSAAG
DLDRTTQTSVESMRDLVEAATDQFRALVDMSQREADGFDSATKLALDRFEALAAEARDAL
MEETRRALEQMRATAEDSRAAAADAAEQARLRTDRLGESLFDAAQKADTAADARIADARR
IVTETSGLVEETGERMVSRLETLVARLNSALSEIDTAVADIDERAARLPQEARARADAVR
ATVEEGLASLSAASRKAAEDTEALDVGFQDRVRRNYDMLTEAVRLMGVVSGDTTPARRRE
PAAEIEARPEPRPERRTDRPTPPASPPAEERRFGLRSRLRLEPAETPPPATDKGLDWSDL
IDGDDDNEAPLELDTPSPSPAEAEALSDRVAAAIRRMGVDPNALLPRSRVEEAARAFSNG
DPDAARQIVRRVAPAAVRSVSRRVLSDAELRADAERYVRNFAVMLNASARAGDSAAVQSS
LASDSGRAFMLLDAAVGDLG