Protein Info for A4249_RS06270 in Brevundimonas sp. GW460-12-10-14-LB2

Annotation: translation elongation factor Ts

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 313 TIGR00116: translation elongation factor Ts" amino acids 1 to 311 (311 residues), 296 bits, see alignment E=1.3e-92 PF00889: EF_TS" amino acids 75 to 292 (218 residues), 221.3 bits, see alignment E=5.2e-70

Best Hits

Swiss-Prot: 68% identical to EFTS_CAUVN: Elongation factor Ts (tsf) from Caulobacter vibrioides (strain NA1000 / CB15N)

KEGG orthology group: K02357, elongation factor Ts (inferred from 89% identity to bsb:Bresu_2499)

Predicted SEED Role

"Translation elongation factor Ts"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A160HWS8 at UniProt or InterPro

Protein Sequence (313 amino acids)

>A4249_RS06270 translation elongation factor Ts (Brevundimonas sp. GW460-12-10-14-LB2)
MAEITAALVKELRERSGVGMMDCKKALVENDGNIEAAIDWLRAKGLSKAAKKADRVAAEG
LVAVASKEDGKGEVAAAIEFNAETDFVARNELFQNAAKSFAQLGLEHHSVEALHGAELEA
GKTVQDEVTNMIATIGENMQLRRAARLSVSEGVVSTYVHNAVSPGVGRIGVLVALEGEGD
KTALRELGRKIAMHVAATAPLSLNTDDLDPAAIEKERTVLTEKAKEEGRPEAMIAKIVEG
QINKFQKDVVLSKQPFVMDPDVTIEQLVANSAKELGSSNLHLAGFVRLALGEGVEKVEGP
DFASEVASMMGGN