Protein Info for A4249_RS05525 in Brevundimonas sp. GW460-12-10-14-LB2

Annotation: holo-ACP synthase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 133 TIGR00516: holo-[acyl-carrier-protein] synthase" amino acids 1 to 130 (130 residues), 86.3 bits, see alignment E=2e-28 TIGR00556: phosphopantetheine--protein transferase domain" amino acids 2 to 129 (128 residues), 74.9 bits, see alignment E=6.4e-25 PF01648: ACPS" amino acids 4 to 105 (102 residues), 58 bits, see alignment E=4.6e-20

Best Hits

Swiss-Prot: 78% identical to ACPS_PHEZH: Holo-[acyl-carrier-protein] synthase (acpS) from Phenylobacterium zucineum (strain HLK1)

KEGG orthology group: K00997, holo-[acyl-carrier protein] synthase [EC: 2.7.8.7] (inferred from 89% identity to bsb:Bresu_1966)

Predicted SEED Role

"Holo-[acyl-carrier protein] synthase (EC 2.7.8.7)" in subsystem Fatty Acid Biosynthesis FASII (EC 2.7.8.7)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.8.7

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A160HYZ9 at UniProt or InterPro

Protein Sequence (133 amino acids)

>A4249_RS05525 holo-ACP synthase (Brevundimonas sp. GW460-12-10-14-LB2)
MIIGVGADLSDIRRIQASLDRFGDRFKARCFTELERTRSDRKPDPAWSYAKRFAAKEACA
KALGTGMRADVYWRDMGVVNLRSGQPTMALTGHAAEHLARLTPAGHEARIHLTLSDEHPY
ALAFVVIEALPQS