Protein Info for A4249_RS04795 in Brevundimonas sp. GW460-12-10-14-LB2

Annotation: CinA family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 162 PF02464: CinA" amino acids 8 to 160 (153 residues), 178.8 bits, see alignment E=2.9e-57 TIGR00199: amidohydrolase, PncC family" amino acids 17 to 161 (145 residues), 145.3 bits, see alignment E=7.4e-47

Best Hits

KEGG orthology group: K03743, (no description) (inferred from 65% identity to bsb:Bresu_1778)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A168NX51 at UniProt or InterPro

Protein Sequence (162 amino acids)

>A4249_RS04795 CinA family protein (Brevundimonas sp. GW460-12-10-14-LB2)
MFSQDIAHLAQQIVATASERGLMLATAESCTGGLVSAAITAIPGSSAVLDRGFVTYSNEA
KAQMLGVSLESLSVHGAVSQAVAVAMAEGAVAHSRASVSVSVTGVAGPGGGSVDKPVGLV
HFAASGPQGVVHRVERFGDLGRDDIRQASVRVALELLADRLA