Protein Info for A4249_RS04430 in Brevundimonas sp. GW460-12-10-14-LB2

Annotation: TonB-dependent receptor

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1023 signal peptide" amino acids 1 to 28 (28 residues), see Phobius details PF07715: Plug" amino acids 63 to 187 (125 residues), 51.8 bits, see alignment E=1.1e-17 PF00593: TonB_dep_Rec" amino acids 404 to 991 (588 residues), 94.2 bits, see alignment E=1.7e-30

Best Hits

KEGG orthology group: None (inferred from 72% identity to bsb:Bresu_3006)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A168NEH5 at UniProt or InterPro

Protein Sequence (1023 amino acids)

>A4249_RS04430 TonB-dependent receptor (Brevundimonas sp. GW460-12-10-14-LB2)
MKMQSKFALMAGAASAVLLISAGAALAQDATPQSTPAQEGEAAQVEDIVVVGSQIRGAST
TAALPVTVVTQEEIIATGAVSGDDLLRSIPQMGDVLFSSANNPQTSNAARGDVNSVNLRS
LGVGNTLVLLNGRRIVQHPTSQGTSDTGTVPVLSYNSNAIPVSGLERLEVLLDGAAAIYG
ADAVAGVVNTVLQQDFDGLEMKAQYGGAEGTHRREFTFGMFAGKDFERGNLSGFLDYTNR
TAQQASDEPYTASDDRRSLFANVPGYENSTDTDGRSSYTAWANFQTPFQVRRGTTALTTG
AGAFHNQPSSFGCTAPVGGDVCLASGNISYSGAGRELRYDAARGTTQSPDIERLNLFVSG
HYDLDNGVTAFGELGYYTASTQNIQPPTILLNPLWIPASNYWNPFGPVTFADGTRNPNRL
AGLTNVPTAGTAVKLVRYRFNDLGAQVVDVDNWQSRFLGGLRGEWRGFDWESALLYSEAE
ATDSSNAVNLTALQANLALSTPDAYNPFSGGCVNDTSFGDCTPSSQAAIDAITTDLTRVS
KTTLALWDFKVSRPDVFTLPGGPVGMALGVEARRETQRDDRDADLDGTNVFRDSVSGEIS
QSNIAAVSSNPDTYGKREVYSAYVEFAVPVVSPEMNIPLVRSLDFQLAGRYEHYSDFGDV
AKPKIAMAWDLVEGVRVRGSYSEGFRAPNLEQTNAAQYGRLSTNNDYIRCEADLRLGRIT
NFNQCSQPASASLLVSGNPELQPEESRNQSIGLVLQPWFIPEQFGRFTFTLDRWKIEQEK
IVGLLGAQSNVVLDYLNILNGTRNDNVNRAAVTADDIAFFQGSGITPVGQIVSVEDQFIN
LLPQTVEGLDIGLQWRLRGTPWGNFRASVNAAHLTKFDRSPGPLVESLFAAREAGQINAN
TPLPISQTLLARNGRPEWRVTGSFTWSQGPWQVGAFTQYNSAVTETGFLSAQGDPWQVDS
QITGNLYGQYEFGDNAGFASGTTVRLGARNITDEQPPLTSSGYLGALYNPYGRYWYANIS
KTF