Protein Info for A4249_RS01710 in Brevundimonas sp. GW460-12-10-14-LB2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 127 transmembrane" amino acids 20 to 45 (26 residues), see Phobius details amino acids 65 to 92 (28 residues), see Phobius details amino acids 95 to 121 (27 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 71% identity to bsb:Bresu_0930)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A168N5P9 at UniProt or InterPro

Protein Sequence (127 amino acids)

>A4249_RS01710 hypothetical protein (Brevundimonas sp. GW460-12-10-14-LB2)
MTNEPHFIAGQPSEGKVGALIAWALFILSIPSANVLVLIGLVVSYVTRGTATGVARQHVE
AQIRLFWSVFWWTIAAWIGIFVSALASVVLIGIPFLLLFLLVWFLLSVWFTIKSVIGLLN
LLNDKPI