Protein Info for A4249_RS01675 in Brevundimonas sp. GW460-12-10-14-LB2

Annotation: DMT family transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 148 signal peptide" amino acids 1 to 20 (20 residues), see Phobius details transmembrane" amino acids 37 to 57 (21 residues), see Phobius details amino acids 69 to 90 (22 residues), see Phobius details amino acids 96 to 115 (20 residues), see Phobius details amino acids 127 to 145 (19 residues), see Phobius details PF04657: DMT_YdcZ" amino acids 7 to 144 (138 residues), 137.3 bits, see alignment E=2.2e-44

Best Hits

KEGG orthology group: K09936, hypothetical protein (inferred from 82% identity to bsb:Bresu_0915)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A168N5I9 at UniProt or InterPro

Protein Sequence (148 amino acids)

>A4249_RS01675 DMT family transporter (Brevundimonas sp. GW460-12-10-14-LB2)
MNPSLLAILVVILAGGATALQAPTNARLATAVASPVNAAFISFAVGTTVLGILAAVLHTR
PDMAATRALPWYAWLGGAYGACFVVAAAWGVPRLGVAMTITLMVGGQLLLSLALDHFGAL
GVPRQPLNIGRVAGVGLVLAGVLLVRRS