Protein Info for A4249_RS01660 in Brevundimonas sp. GW460-12-10-14-LB2

Annotation: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 214 transmembrane" amino acids 16 to 37 (22 residues), see Phobius details amino acids 49 to 71 (23 residues), see Phobius details amino acids 91 to 119 (29 residues), see Phobius details amino acids 147 to 165 (19 residues), see Phobius details amino acids 184 to 204 (21 residues), see Phobius details TIGR00560: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase" amino acids 10 to 211 (202 residues), 135.9 bits, see alignment E=1.1e-43 PF01066: CDP-OH_P_transf" amino acids 10 to 198 (189 residues), 109.5 bits, see alignment E=1e-35

Best Hits

Predicted SEED Role

"CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)" in subsystem Glycerolipid and Glycerophospholipid Metabolism in Bacteria (EC 2.7.8.5)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.8.5

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A168NVW5 at UniProt or InterPro

Protein Sequence (214 amino acids)

>A4249_RS01660 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Brevundimonas sp. GW460-12-10-14-LB2)
MTSAHRANPIPNILTGLRLAAGVVMFAMMAGAAPGALEAWLSPETQGRFSVWAFWIFVIA
ASTDWVDGYLARRWNATTRWGAILDPIADKVLVTGAILGVLASGSLPGIALPCGLILFRE
FAVSALRETMAGRIELPVTLAAKWKTTVQMVALAALQLTLLWGALGLQNDDGSPLAWQPA
FESFAIFLIWFAAIITLWTGWQYFSEARRQMRDL