Protein Info for A4249_RS00935 in Brevundimonas sp. GW460-12-10-14-LB2

Annotation: lytic transglycosylase domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF01464: SLT
  • amino acids 380 to 479 (100 residues), 72.1 bits, E=1.5e-24

Predicted SEED Role

"Soluble lytic murein transglycosylase precursor (EC 3.2.1.-)" (EC 3.2.1.-)

KEGG Metabolic Maps

• Ascorbate and aldarate metabolism
• Glycosaminoglycan degradation
• Nucleotide sugars metabolism
• Ubiquinone and menaquinone biosynthesis

Isozymes

Compare fitness of predicted isozymes for: 3.2.1.-

Use Curated BLAST to search for 3.2.1.-

Sequence Analysis Tools

See A0A168N0L9 at UniProt or InterPro

Protein Sequence (561 amino acids)

>A4249_RS00935 lytic transglycosylase domain-containing protein (Brevundimonas sp. GW460-12-10-14-LB2)
MFLFRRAILASTLVLAFCAATTAATAETPYGSTAEASAGSGRPTALSSADRISYTTAFDA
LRRGDIETARMAARQAQDRVLLGQVEFESLFHPDHVATYEELTAWLETYSDLPCADRVYT
LALRRRPDGAPEPVRPGGVLGRTWNSLVSAVSGDGGVTDPAKAARVAYNNDDLTGASALG
RQIGDWWTVGLAEWRLGQFHESFAAFERVANDPTEDAWVRAGAAFWTARAAAQSGRQDRV
TDYLRLSAQWPATFYGQIALRQLGEEPTIENMGPRPYEAEPRLRRAAYVPQSAAVEPTAL
EAFVQADARAKRTVAFYEVGRNADAETELRSGLRTAVGDAAKMWTALARAILPVNNGDAT
RIDATRYPMPDLAPEGGFVIERALVYALARKETDFNPNARSSVGAYGLMQVMPTTAAEMT
GDRTFVSDPTKLLVPAVNMRLGQAYINKMLALPAFQGDLLRAVASYNAGPGPMLAAVRKL
GADADPLLLIETIDVPQARDYVEKVMASYWIYQRLFGGPLKTLDAVASGARAVPMALDYV
APPPQAEPVLIAETTPIAGAR