Gene info for b4459 in Escherichia coli BW25113

Name: ryjA
Annotation: unknown RNA (NCBI)
Type 6: Other non-coding RNA
Located on scaffold 7023, - strand, nucleotides 4,275,950 to 4,276,089
See nucleotide sequence around b4459 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc

Nearby Genes

500 ntssb and yjcB are separated by 98 nucleotidesyjcB and yjcC are separated by 429 nucleotidesyjcC and soxS are separated by 2 nucleotidessoxS and soxR are separated by 85 nucleotidessoxR and ryjA overlap by 7 nucleotidesryjA and yjcD are separated by 412 nucleotidesyjcD and yjcE are separated by 151 nucleotidesyjcE and yjcF are separated by 153 nucleotidesyjcF and actP are separated by 177 nucleotidesactP and yjcH overlap by 4 nucleotides b4059: ssb - single-strand DNA-binding protein (NCBI), at 4,272,148 to 4,272,684 ssb b4060: yjcB - orf, hypothetical protein (VIMSS), at 4,272,783 to 4,273,064 yjcB b4061: yjcC - predicted signal transduction protein (EAL domain containing protein) (NCBI), at 4,273,494 to 4,275,080 yjcC b4062: soxS - DNA-binding transcriptional dual regulator (NCBI), at 4,275,083 to 4,275,406 soxS b4063: soxR - DNA-binding transcriptional dual regulator, Fe-S center for redox-sensing (NCBI), at 4,275,492 to 4,275,956 soxR b4459: ryjA - unknown RNA (NCBI), at 4,275,950 to 4,276,089 ryjA b4064: yjcD - predicted permease (NCBI), at 4,276,502 to 4,277,851 yjcD b4065: yjcE - predicted cation/proton antiporter (NCBI), at 4,278,003 to 4,279,652 yjcE b4066: yjcF - hypothetical protein (NCBI), at 4,279,806 to 4,281,098 yjcF b4067: actP - acetate permease (NCBI), at 4,281,276 to 4,282,925 actP b4068: yjcH - required for glycolate transport, with actP (from data), at 4,282,922 to 4,283,236 yjcH
Locus Name Description Strand Phenotype
b4059 ssb single-strand DNA-binding protein (NCBI) + no data
b4060 yjcB orf, hypothetical protein (VIMSS) - insig.
b4061 yjcC predicted signal transduction protein (EAL domain containing protein) (NCBI) + insig.
b4062 soxS DNA-binding transcriptional dual regulator (NCBI) - strong
b4063 soxR DNA-binding transcriptional dual regulator, Fe-S center for redox-sensing (NCBI) + strong
b4459 ryjA unknown RNA (NCBI) - no data
b4064 yjcD predicted permease (NCBI) + insig.
b4065 yjcE predicted cation/proton antiporter (NCBI) + sig.
b4066 yjcF hypothetical protein (NCBI) - insig.
b4067 actP acetate permease (NCBI) - sig.
b4068 yjcH required for glycolate transport, with actP (from data) - sig.

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