Gene info for b4430 in Escherichia coli BW25113

Name: rydB
Annotation: regulatory sRNA (NCBI)
Type 6: Other non-coding RNA
Located on scaffold 7023, - strand, nucleotides 1,762,737 to 1,762,804
See nucleotide sequence around b4430 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc

Nearby Genes

500 ntsufS and sufD overlap by 4 nucleotidessufD and sufC overlap by 26 nucleotidessufC and ynhE are separated by 9 nucleotidesynhE and sufA are separated by 8 nucleotidessufA and rydB are separated by 326 nucleotidesrydB and ydiH are separated by 153 nucleotidesydiH and ydiI are separated by 99 nucleotidesydiI and ydiJ overlap by 4 nucleotidesydiJ and ydiK are separated by 388 nucleotidesydiK and rprA are separated by 185 nucleotides b1680: sufS - selenocysteine lyase (NCBI), at 1,757,327 to 1,758,547 sufS b1681: sufD - component of SufBCD complex (NCBI), at 1,758,544 to 1,759,815 sufD b1682: sufC - cysteine desulfurase ATPase component (NCBI), at 1,759,790 to 1,760,536 sufC b1683: ynhE - orf, hypothetical protein (VIMSS), at 1,760,546 to 1,762,033 ynhE b1684: sufA - iron-sulfur cluster assembly scaffold protein (NCBI), at 1,762,042 to 1,762,410 sufA b4430: rydB - regulatory sRNA (NCBI), at 1,762,737 to 1,762,804 rydB b1685: ydiH - predicted protein (RefSeq), at 1,762,958 to 1,763,146 ydiH b1686: ydiI - hypothetical protein (NCBI), at 1,763,246 to 1,763,656 ydiI b1687: ydiJ - predicted FAD-linked oxidoreductase (NCBI), at 1,763,653 to 1,766,709 ydiJ b1688: ydiK - predicted inner membrane protein (NCBI), at 1,767,098 to 1,768,210 ydiK b4431: rprA - Positive regulatory sRNA for RpoS translation; non-essential gene (RefSeq), at 1,768,396 to 1,768,501 rprA
Locus Name Description Strand Phenotype
b1680 sufS selenocysteine lyase (NCBI) - strong
b1681 sufD component of SufBCD complex (NCBI) - strong
b1682 sufC cysteine desulfurase ATPase component (NCBI) - strong
b1683 ynhE orf, hypothetical protein (VIMSS) - strong
b1684 sufA iron-sulfur cluster assembly scaffold protein (NCBI) - strong
b4430 rydB regulatory sRNA (NCBI) - no data
b1685 ydiH predicted protein (RefSeq) - insig.
b1686 ydiI hypothetical protein (NCBI) - insig.
b1687 ydiJ predicted FAD-linked oxidoreductase (NCBI) - strong
b1688 ydiK predicted inner membrane protein (NCBI) + insig.
b4431 rprA Positive regulatory sRNA for RpoS translation; non-essential gene (RefSeq) + insig.

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