Protein Info for b4158 in Escherichia coli BW25113

Name: yjeO
Annotation: conserved inner membrane protein (NCBI)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 104 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details transmembrane" amino acids 55 to 72 (18 residues), see Phobius details amino acids 79 to 98 (20 residues), see Phobius details PF10840: DUF2645" amino acids 6 to 103 (98 residues), 139.9 bits, see alignment E=1.7e-45

Best Hits

Swiss-Prot: 100% identical to YJEO_ECOLI: Inner membrane protein YjeO (yjeO) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 100% identity to eco:b4158)

Predicted SEED Role

"FIG00639836: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See P39284 at UniProt or InterPro

Protein Sequence (104 amino acids)

>b4158 conserved inner membrane protein (NCBI) (Escherichia coli BW25113)
MSARMFVLCCIWFIVAFLWITITSALDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMT
LPLFFPFLWFALWRKKRGWFMYATALAIFGYWLWQFFLRYQFCL