Protein Info for b2538 in Escherichia coli BW25113

Name: hcaE
Annotation: 3-phenylpropionate dioxygenase, large (alpha) subunit (NCBI)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 453 PF00355: Rieske" amino acids 43 to 125 (83 residues), 73.3 bits, see alignment E=1.2e-24 PF00848: Ring_hydroxyl_A" amino acids 165 to 433 (269 residues), 118.2 bits, see alignment E=4.8e-38

Best Hits

Swiss-Prot: 100% identical to HCAE_ECO57: 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha (hcaE) from Escherichia coli O157:H7

KEGG orthology group: K05708, large terminal subunit of phenylpropionate dioxygenase [EC: 1.14.12.19] (inferred from 100% identity to eco:b2538)

MetaCyc: 100% identical to putative 3-phenylpropionate/cinnamate dioxygenase subunit alpha (Escherichia coli K-12 substr. MG1655)
3-phenylpropanoate dioxygenase. [EC: 1.14.12.19]; 1.14.12.19 [EC: 1.14.12.19]

Predicted SEED Role

"3-phenylpropionate dioxygenase, alpha subunit (EC 1.14.12.19)" in subsystem Cinnamic Acid Degradation or Flavohaemoglobin or Phenylpropionate Degradation (EC 1.14.12.19)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 1.14.12.19

Use Curated BLAST to search for 1.14.12.19

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See P0ABR5 at UniProt or InterPro

Protein Sequence (453 amino acids)

>b2538 3-phenylpropionate dioxygenase, large (alpha) subunit (NCBI) (Escherichia coli BW25113)
MTTPSDLNIYQLIDTQNGRVTPRIYTDPDIYQLELERIFGRCWLFLAHESQIPKPGDFFN
TYMGEDAVVVVRQKDGSIKAFLNQCRHRAMRVSYADCGNTRAFTCPYHGWSYGINGELID
VPLEPRAYPQGLCKSHWGLNEVPCVESYKGLIFGNWDTSAPGLRDYLGDIAWYLDGMLDR
REGGTEIVGGVQKWVINCNWKFPAEQFASDQYHALFSHASAVQVLGAKDDGSDKRLGDGQ
TARPVWETAKDALQFGQDGHGSGFFFTEKPDANVWVDGAVSSYYRETYAEAEQRLGEVRA
LRLAGHNNIFPTLSWLNGTATLRVWHPRGPDQVEVWAFCITDKAASDEVKAAFENSATRA
FGPAGFLEQDDSENWCEIQKLLKGHRARNSKLCLEMGLGQEKRRDDGIPGITNYIFSETA
ARGMYQRWADLLSSESWQEVLDKTAAYQQEVMK